MassSpecSettings_IntegrateChromatograms_StreamFind
Source:R/class_S3_MassSpecSettings.R
MassSpecSettings_IntegrateChromatograms_StreamFind.RdIntegrates chromatograms using the function findpeaks from the package pracma with natively
added peak exclusion and evaluation steps.
Usage
MassSpecSettings_IntegrateChromatograms_StreamFind(
merge = TRUE,
closeByThreshold = 45,
minPeakHeight = 0,
minPeakDistance = 10,
minPeakWidth = 5,
maxPeakWidth = 120,
minSN = 10
)Arguments
- merge
Logical (length 1) indicating if the nearby peaks should be merged.
- closeByThreshold
Numeric (length 1) with the maximum distance between peaks to be merged.
- minPeakHeight
Numeric (length 1) with the minimum peak height to be considered.
- minPeakDistance
Numeric (length 1) with the minimum distance between peaks.
- minPeakWidth
Numeric (length 1) with the minimum peak width.
- maxPeakWidth
Numeric (length 1) with the maximum peak width.
- minSN
Numeric (length 1) with the minimum signal-to-noise ratio.