MassSpecMethod_CalculateSpectraCharges_native S7 class — MassSpecMethod_CalculateSpectraCharges

Calculates spectral charges from multi-charged compounds (e.g. proteins and monoclonal antibodies) for mass deconvolution.

Usage

MassSpecMethod_CalculateSpectraCharges_native(
  onlyTopScans = FALSE,
  topScans = 1,
  roundVal = 35,
  relLowCut = 0.2,
  absLowCut = 300,
  top = 5
)

Arguments

onlyTopScans: Logical (length 1) to consider only the n TopScans with the highest intensity.
topScans: Numeric (length 1) with the number of top scans to be considered.
roundVal: Numeric (length 1) with the rounding value for the m/z values before applying charge clustering.
relLowCut: Numeric (length 1) with the relative low cut for the charge clustering.
absLowCut: Numeric (length 1) with the absolute low cut for the charge clustering.
top: Numeric (length 1) with the number of top charges to be considered.

Value

A MassSpecMethod_CalculateSpectraCharges_native object.